chr17:31258406:A>T Detail (hg38) (NF1)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr17:29,585,424-29,585,424 View the variant detail on this assembly version.
hg38	chr17:31,258,406-31,258,406

HGVS

NF1

Type	Transcript	Protein
RefSeq	NM_000267.3:c.4173A>T	NP_000258.1:p.Arg1391Ser
	NM_001042492.2:c.4236A>T	NP_001035957.1:p.Arg1412Ser
Ensemble	ENST00000356175.7:c.4173A>T	ENST00000356175.7:p.Arg1391Ser
	ENST00000358273.9:c.4236A>T	ENST00000358273.9:p.Arg1412Ser
	ENST00000691014.1:c.4266A>T	ENST00000691014.1:p.Arg1422Ser
	ENST00000696138.1:c.4218A>T	ENST00000696138.1:p.Arg1406Ser

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Pathogenic Likely pathogenic
Review star
Show details

Links

NF1

Type	Database	ID	Link
Gene	MIM	613113	OMIM
	HGNC	7765	HGNC
	Ensembl	ENSG00000196712	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Pathogenic Likely pathogenic	2023-08-25	criteria provided, multiple submitters, no conflicts	Neurofibromatosis, type 1	germline	Detail
Likely pathogenic	2020-12-23	criteria provided, single submitter	not provided	germline	Detail
Pathogenic	2021-05-21	criteria provided, single submitter	Hereditary cancer-predisposing syndrome	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.670	neurofibromatosis 1	NA	CLINVAR		Detail
0.670	neurofibromatosis 1	Mutational and functional analysis of the neurofibromatosis type 1 (NF1) gene.	UNIPROT	9003501	Detail

Annotation

Annotations

Descrption	Source	Links
NM_001042492.3(NF1):c.4236A>T (p.Arg1412Ser) AND Neurofibromatosis, type 1	ClinVar	Detail
NM_001042492.3(NF1):c.4236A>T (p.Arg1412Ser) AND not provided	ClinVar	Detail
NM_001042492.3(NF1):c.4236A>T (p.Arg1412Ser) AND multiple conditions	ClinVar	Detail
NA	DisGeNET	Detail
Mutational and functional analysis of the neurofibromatosis type 1 (NF1) gene.	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs137854554 dbSNP
Genome: hg38
Position: chr17:31,258,406-31,258,406
Variant Type: snv
Reference Allele: A
Alternative Allele: T

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